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Cloning Novel ?-Conotoxins And Genetic Diversity Of Conus Lividus

Posted on:2016-03-08Degree:MasterType:Thesis
Country:ChinaCandidate:H L MengFull Text:PDF
GTID:2310330467496148Subject:South of Pharmacy
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There are around800species of cone snails living in the world tropical ocean. Venom of each cone snail species consists of up to2000conopeptides or conotoxins. a-Conotoxins are targeting various nAChR isoforms, which are a specific class of short, disulfide-constrained peptides with CC-C-C framework, therefore, they are widely used as pharmacological probe and directly developed drugs. Untill now, a large number of conotoxins have been discovered by native toxin isolation and cDNA cloning, as well as transcriptome sequencing. However, abundant a-conotoxins have yet to be further discovered and utilied.This study identified4a-conotoxins with introns and125a-conotoxins with partial propeptides and mature sequences by3methods.(1)4a-conotoxins were cloned from Genomic DNA of C. Caracteristicus native to Hainan, China, which based on the conserved DNA sequences of signal peptide and3'-UTR (untranslated region) of A-superfamily genes.(2)123a-conotoxins including94genes of a(4,7),9genes of a(4,6) and20genes of a(4,4) were cloned from38genomic DNA from10conus native to Hainan, China, which based on the conserved intron of a-conotoxins by PCR at multiple annealing temperatures. Moreover,12genes with3-Cys framework,13genes with ?? framework,5genes with5-Cys framework,1genes with ??? framework,1genes with ? framework, and1genes with9-Cys framework were also cloned by the method.(3)2?-conotoxins including a(4,7) and ?(4,1) two styles were discovered by transcriptome sequencing of C.lividus native to Hainan, China. Besides the two a-conotoxins, we have got32V-superfamily conotoxins,2O-superfamily conotoxins,1O3-superfamily conotoxin,3M-superfamily conotoxins,4T-superfamily conotoxins,1A-superfamily conotoxin,1Y-superfamily conotoxins, and10unknown superfamily conotoxins.(4)The introns of a-conotoxins shows that the repetition of Microsatellite DNA in introns has an infect on the expression of ?-conotoxins. Further more, introns is associated with conus species and their prey.(5) Analysis of mature region of ?-conotoxins indicated that there was a preference for particular synonymous Cys codon, a conservative proline behind Cys2, and a relationship of various subtype.75CIS genes were cloned from Genomic DNA of15C. lividusnative to Hainan, China, which based on256bp of ?-glutamate carboxylase.According to genetic difference of75CIS genes, variant3alleles in31bases were discovered. It shows genetic diversity of C.lividus.
Keywords/Search Tags:?-conotoxins, DNA clone, transcriptome sequencing, introns, Phynolgeny analysis
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