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Identification And Transformation Of The Key Sites Of The Strong Promoter PCAT1 Of Pichia Pastoris

Posted on:2021-04-26Degree:MasterType:Thesis
Country:ChinaCandidate:L Y NongFull Text:PDF
GTID:2370330611967003Subject:Fermentation engineering
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Pichia pastoris is one of the important industrial microorganisms for heterologous protein expression.It has advantages including suitable for high-density fermentation and post-translational modification.The important goal of studying the heterologous protein expression system is to increase the yield of heterologous proteins,and screening for strong promoters can increase the transcription level of heterologous genes,thereby effectively increasing the yield of heterologous proteins.PAOX1 is currently the most widely used Pichia pastoris promoter.It has strong activity,but methanol needs to be used to induce PAOX1.Methanol is flammable,explosive,and toxic.It has a certain security risk for industrial storage and transportation of methanol.PCAT1 is a promoter of peroxidase in the methanol utilization pathway of Pichia pastoris.Its methanol-inducing activity is comparable to PAOX1,and PCAT1 activity is higher than PAOX1 when expressing certain enzymes;meanwhile,PCAT1 is repressed by high concentrations of glucose and derepressed by low concentration of glucose.PCAT1 can be used to express transcription factors related to methanol induction,and PAOX1-based non-methanol-utilizing Pichia highly expressing strains can be constructed.However,as of now,there is a lack of research on PCAT1.In this study,we modified the core promoter region of PCAT1,randomly mutated the PCAT1sequence,and engineered the transcription factor binding site of PCAT1 to screen for more active PCAT1 variants and analyze the functional elements affecting PCAT1 activity.The main research contents and results are as follows:?1?Transformation of PCAT1 core startup areaBy truncating the PCAT1-1000 sequence and characterizing the activity of PCAT1 variants,the PCAT1 core promoter region was determined;the PCAT1 core promoter was divided into five parts,and each core promoter regions was knocked out from PCAT1-1000 respectively to determine the most influential PCAT1 activity.Analysis of the transcription factor binding sites?TFBSs?of PCAT1-1000,using the online prediction software Mat Inspector,found that the core promoter region that most affects PCAT1 activity only has the binding site of the factor HAP1.01.Duplication of the binding site of HAP1.01 lead to the activity of the constructed PCAT1 variant significantly improve,and its methanol-inducing activity was increased by 16%.?2?Random mutation of PCAT1 sequenceMutation was randomly introduced into the PCAT1 sequence by EP-PCR,and the activity of the PCAT1 variant was characterized by EGFP.The PCAT1 promoter library with an activity range of 26%to 138%was obtained.The-118 bp base of PCAT1 mutating from A to G can increase the methanol-induced activity of the PCAT1 promoter.Through the analysis of PCAT1promoter variants by Mat Inspector,it was found that this mutation lead to F$YMCM binding site decrease and F$CSRE and F$YGAL binding sites increase in PCAT1.?3?Modification of the transcription factor binding sites?TFBSs?of PCAT1According to Mat Inspector's analysis of TFBSs of PCAT1-1000,several TFBSs of PCAT1 were duplicated or deleted,and it was found that the duplicating HAP1.05 binding site can effectively improve the activity of PCAT1.Combined with the results of the transformation of the core promoter region of PCAT1,duplicating the binding sites of HAP1.05 and HAP1.01 at the same time on PCAT1-1000,the activity of the PCAT1 variant was greatly improved.Among them,under the conditions of methanol induction,CALB was expressed with this PCAT1 variant,and the Candida antarctica lipase B?CALB?yield phase was obtained 77%improvement over the control.
Keywords/Search Tags:Pichia pastoris, promoter PCAT1, TFBSs, random mutation, CALB
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