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Synthesis and kinetic evaluation of tyrosine analogs---implications for the catalytic mechanism of tyrosine phenol-lyase from Citrobacter freundii

Posted on:2001-11-17Degree:Ph.DType:Thesis
University:University of GeorgiaCandidate:Watkins, Edmond BlakeFull Text:PDF
GTID:2464390014453090Subject:Chemistry
Abstract/Summary:PDF Full Text Request
The tyrosine analogs, 2-aza-D,L-tyrosine and 3-aza-D,L-tyrosine, were synthesized, and their steady state kinetic parameters were determined for tyrosine phenol-lyase from Citrobacter freundii. Neither compound was found to be a substrate upon examination using the LDH/NADH-coupled assay. Both analogs were found to be inhibitors of TPL, with 3-azatyrosine exhibiting a Ki of 3.36 mM, while 2-azatyrosine had a pH-independent Ki of 17 μM.; The synthetic usefulness of tyrosine phenol-lyase from Citrobacter freundii was also examined. The amino acids, 2-aza-L-tyrosine and 3-aza-L-tyrosine, were synthesized and their pre-steady-state kinetic parameters were determined. Stopped-flow analysis revealed that both azatyrosines bind to TPL and undergo deprotonation to form quinonoid intermediates with absorbance maxima at 504 nm. At high amino acid concentrations, 3-azatyrosine seems to undergo either elimination or transamination as indicated by a decrease in the absorbance at 504 nm.; The tyrosine analogs, erythro- and threo-β-hydroxy-D,L-tyrosines, were synthesized and their steady state and pre-steady-state kinetic parameters were determined for tyrosine phenol-lyase from Citrobacter freundii . Examination of the hydroxytyrosines, using the LDH/NADH-coupled assay, revealed that neither compound underwent elimination in the presence of TPL, possibly due to steric effects. However, both displayed an inhibitory effect, with Ki values of 0.24 mM and 0.25 mM for erythro - and threo-β-hydroxytyrosines, respectively. Analysis using stopped-flow kinetic methods showed that both compounds were capable of quinonoid intermediate formation, although the formation was quite slow.; Extensive efforts were made to synthesize 1,3,4,5-tetrahydro-2-oxo-L-histidine for evaluation as an inhibitor and mechanistic probe for tyrosine phenol-lyase from Citrobacter freundii. The specific details of the synthetic endeavor are presented, although the total synthesis was never achieved.
Keywords/Search Tags:Tyrosine phenol-lyase, Citrobacter freundii, Kinetic, Analogs
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