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Expression And Mechanism Of Hsa_circ_0005397 In Hepatocellular Carcinoma

Posted on:2023-01-29Degree:MasterType:Thesis
Country:ChinaCandidate:R Y LiuFull Text:PDF
GTID:2544307187966559Subject:Clinical laboratory diagnostics
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Objective 1.To detect the expression of circular RNA(circ RNA)hsa_circ_0005397 in tissue,plasma and cell lines of patients with hepatocellular carcinoma(HCC),and to explore the value of plasma hsa_circ_0005397 in the clinical diagnosis and treatment of HCC;2.To study the function of hsa_circ_0005397 in HCC cells in vivo and in vitro;3.To study the effect of eukaryotic translation initiation factor 4A3(EIF4A3)regulating the expression of hsa_circ_0005397 on the function of HCC cells.Methods 1.Screening of differentially expressed circ RNAs in the Gene Expression Omnibus(GEO)database;2.Detection and evaluation of the hsa_circ_0005397 method by quantitative real-time PCR(q RT-PCR);3.To investigate the clinical value of plasma hsa_circ_0005397 in HCC by ROC curve,correlation analysis of pathological parameters and combined detection of serum AFP and AFP-L3;4.Expression of hsa_circ_0005397 in HCC cancer tissues and cell lines detected by q RT-PCR;5.The RNA interference vector and overexpression vector of hsa_circ_0005397 were constructed respectively,and their efficiency was verified by q RT-PCR;6.CCK-8,clone formation,Transwell and cell cycle assays to analyze the function of hsa_circ_0005397 in HCC cells;7.Nude mice xenograft model was constructed to analyze the effect of hsa_circ_0005397 on HCC growth in vivo;8.Bioinformatics prediction and RNA binding protein immunoprecipitation(RIP)test to verify the RNA-binding protein(RBP)of hsa_circ_0005397;9.The expression of EIF4A3 in HCC tissues was detected by q RT-PCR,and the correlation between it and the expression of hsa_circ_0005397 was analyzed;10.The RNA interference vector of EIF4A3 was constructed,and its efficiency was verified by q RT-PCR and Western blot;11.Reverse experiment to explore the effect of EIF4A3 regulating hsa_circ_0005397 expression on the proliferation,migration and invasion of HCC cells.Results 1.Screen out hsa_circ_0005397 which is highly expressed in HCC from GEO database;2.The melting curve of hsa_circ_0005397was detected by q RT-PCR with single-peak specificity,agarose gel electrophoresis and Sanger sequencing showed that the primers were designed correctly,and the method had good linearity;Actinomycin D and Rnase R enzyme tests confirmed that hsa_circ_0005397 had stable ring structure;3.The plasma hsa_circ_0005397 level in HCC patients was increased,and it was correlated with tumor size(P=0.02)and TNM stage(P=0.006);Its combined detection with serum AFP and AFP-L3 could improve the sensitivity for diagnosing HCC;The postoperative dynamic monitoring showed that the content of plasma hsa_circ_0005397 in patients after operation was significantly decreased;4.Hsa_circ_0005397 is highly expressed in cancer tissues of HCC patients and HCC cell lines;5.Two hsa_circ_0005397 RNA interference vectors(si1,si2)were constructed,and the expression of hsa_circ_0005397 decreased after transfection into BEL-7404 and LM3 cells respectively;hsa_circ_0005397 overexpression vector(pc DNA)was constructed,and hsa_circ_0005397 was expressed after transfection into SK-Hep1 cells rise;6.The proliferation,clone formation,invasion and migration of BEL-7404 and LM3 cells transfected with si1 and si2 decreased,and the cell cycle was arrested in G0/G1 phase;the proliferation,clone formation and invasion of SK-Hep1 cells after transfection with pc DNA,enhanced migration ability and accelerated cell cycle progression;7.In vivo experiments show that RNA interference hsa_circ_0005397 can inhibit the growth of transplanted tumors in nude mice;8.Bioinformatics predicted that EIF4A3 was the RBP of hsa_circ_0005397,and it was confirmed by RIP test;9.EIF4A3 m RNA was highly expressed in HCC cancer tissues,and was positively correlated with the expression of hsa_circ_0005397(P<0.001);10.The RNA interference vector of EIF4A3(sh EIF4A3)was constructed and transfected into BEL-7404 and LM3 cells,respectively,and the expression of EIF4A3 m RNA and protein decreased;11.The expression of hsa_circ_0005397 significantly decreased in LM3 after transfection with sh EIF4A3;the recovery test showed that sh NC+pc DNA could up-regulate the expression of hsa_circ_0005397,while sh EIF4A3+pc DNA co-transfected LM3 cells could significantly inhibit the expression of hsa_circ_0005397;the clone formation test and transwell test further showed that,sh NC+pc DNA can promote the proliferation,migration and invasion of HCC cells,while sh EIF4A3+pc DNA co-transfected LM3 cells can significantly inhibit the proliferation,migration and invasion of HCC cells.Conclusions Hsa_circ_0005397 is highly expressed in HCC tissues and can act as an oncogene to promote HCC growth and metastasis;EIF4A3 promotes the malignant progression of HCC by regulating the expression of hsa_circ_0005397;in addition,the high expression of hsa_circ_0005397 in plasma can be used as a potential biomarker for HCC diagnosis and treatment.
Keywords/Search Tags:hsa_circ_0005397, HCC, EIF4A3, RBP, biomarker
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