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Bayesian model averaging and variable selection in multivariate ecological models

Posted on:2003-09-26Degree:Ph.DType:Dissertation
University:Virginia Polytechnic Institute and State UniversityCandidate:Lipkovich, Ilya AFull Text:PDF
GTID:1460390011485371Subject:Statistics
Abstract/Summary:
Bayesian Model Averaging (BMA) is a new area in modern applied statistics that provides data analysts with an efficient tool for discovering promising models and obtaining estimates of their posterior probabilities via Markov chain Monte Carlo (MCMC). These probabilities can be further used as weights for model averaged predictions and estimates of the parameters of interest. As a result, variance components due to model selection are estimated and accounted for, contrary to the practice of conventional data analysis (such as, for example, stepwise model selection). In addition, variable activation probabilities can be obtained for each variable of interest;This dissertation is aimed at connecting BMA and various ramifications of the multivariate technique called Reduced-Rank Regression (RRR). In particular, we are concerned with Canonical Correspondence Analysis (CCA) in ecological applications where the data are represented by a site by species abundance matrix with site-specific covariates. Our goal is to incorporate the multivariate techniques, such as Redundancy Analysis and Canonical Correspondence Analysis into the general machinery of BMA, taking into account such complicating phenomena as outliers and clustering of observations within a single data-analysis strategy.;Traditional implementations of model averaging are concerned with selection of variables. We extend the methodology of BMA to selection of subgroups of observations and implement several approaches to cluster and outlier analysis in the context of the multivariate regression model. The proposed algorithm of cluster analysis can accommodate restrictions on the resulting partition of observations when some of them form sub-clusters that have to be preserved when larger clusters are formed.
Keywords/Search Tags:Model, BMA, Selection, Multivariate, Variable
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